The 2018 Fortune 500 recently came out and I put it together by MSA and City. I am not doing CSA as not much would change except for the Bay Area would be 3rd behind NYC and Chicago and NYC would further its already sizable lead. DC-Baltimore would remain unchanged as there's no F500 companies HQ'd in the Baltimore MSA this year.
Fortune 500 Companies 2018: Who Made the List
By MSA
1. NYC MSA: 79 companies
2. Chicago MSA: 35 companies
3. Dallas MSA: 22 companies
4. Houston MSA: 21 companies
5. Minneapolis MSA: 18 companies
6. San Francisco MSA: 17 companies
7. San Jose MSA: 16 companies
8T. Atlanta MSA: 15 companies
8T. Washington DC MSA: 15 companies
10. Los Angeles MSA: 13 companies
11T. Philadelphia MSA: 11 companies
11T. Seattle MSA: 11 companies
13T. Boston MSA: 10 companies
13T. Denver MSA: 10 companies
13T. Detroit MSA: 10 companies
13T. St. Louis MSA: 10 companies
17. Cincinnati MSA: 9 companies
18T. Miami MSA: 7 companies
18T. Milwaukee MSA: 7 companies
18T. Nashville MSA: 7 companies
18T. Pittsburgh MSA: 7 companies
18T. Richmond, VA MSA: 7 companies
23T. Bridgeport, CT MSA: 6 companies
23T. Charlotte MSA: 6 companies
23T. Phoenix MSA: 6 companies
By City Proper
1. New York, NY: 49 companies
2. Houston, TX: 19 companies
3. Atlanta, GA: 13 companies
4. Chicago, IL: 12 companies (* McDonald's recently moved from a nearby suburb to the city. Even if not counted it would stay the same ranking)
5. Dallas, TX: 9 companies
6T. Cincinnati, OH: 7 companies
6T. San Francisco, CA: 7 companies
6T. St. Louis, MO: 7 companies
9T. Irving, TX: 6 companies
9T. Minneapolis, MN: 6 companies
9T. Pittsburgh, PA: 6 companies
9T. San Jose, CA: 6 companies
9T. Seattle, WA: 6 companies
14T. Charlotte, NC: 5 companies
14T. Englewood, CO: 5 companies
14T. Milwaukee, WI: 5 companies
14T. Richmond, VA: 5 companies
18T. Boston, MA: 4 companies
18T. Deerfield, IL: 4 companies
18T. Detroit, MI: 4 companies
18T. McLean, VA: 4 companies
18T. Norwalk, CT: 4 companies
18T. Omaha, NE: 4 companies
18T. Phoenix, AZ: 4 companies
18T. Plano, TX: 4 companies
18T. San Antonio, TX: 4 companies
18T. St. Paul, MN: 4 companies