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I'd like to keep my USB external drives spun up, but Mountain Lion keeps spinning them down after some period of time, perhaps 30 min. It used to be with Leopard I could turn that off in the power saving option, but not any more. There seems no way to get the OS to just leave them spun up. I don't care for having to wait for the disk to spin up to access files on it.
I own a PC with external disks that unfortunately have the "shut down" embedded in firmware (i.e. no activity in five minutes = disk spins down). It cannot be turned off. However, I worked it around with a tool which writes and deletes a small dummy file to the drive every minute. It's called HDKeepAlive. Perhaps something similar exists in the Mac world.
Basically what was described above - keep the disk going so you don't get the spin up delays.
My only advice - get SSD if you can afford the capacity you need!
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