| Name | Address | Enrollment | Grade span |
|---|---|---|---|
| Central Hi | 1801 Losey Blvd S | 1,136 | 9-12 |
| Emerson El | 2101 Campbell Rd | 361 | KG-5 |
| Hamilton Early Learning Ctr | 1111 7th St S | 119 | KG-2 |
| Hintgen El | 3505 28th St S | 386 | KG-5 |
| La Crosse Design Inst | 1900 Denton St | 39 | 7-8 |
| La Crosse Offsite Preschool | 807 East Ave S | 144 | PK-KG |
| LaCrossroads Charter | 1801 Losey Blvd S | 70 | 9-12 |
| Lincoln Mid | 510 9th St S | 352 | 6-8 |
| Longfellow Mid | 1900 Denton St | 505 | 6-8 |
| North Woods International Sch | 2541 Sablewood Rd | 417 | KG-5 |
| Sch of Technology & Arts | 1111 7th St S | 126 | KG-5 |
| Sch of Technology & Arts II | 510 9th St S | 24 | 6-8 |
| Southern Bluffs El | 4010 Sunnyside Dr | 374 | KG-5 |
| Spence El | 2150 Bennett St | 385 | KG-5 |
| State Road El | N1821 Hagen Rd | 293 | KG-5 |
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